List of accepted publications

  • Cell specialization and coordination in Arabidopsis leaves upon pathogenic attack revealed by scRNA-seq.
    Etienne Delannoy, Bastien Batardiere, Stéphanie Pateyron, Ludivine Soubigou-Taconnat, Julien Chiquet, Jean Colcombet, Julien Lang.
    Web paper

Preprint

  • Finite-sum optimization: Adaptivity to smoothness and loopless variance reduction
    Bastien Batardière, Joon Kwon.
    Arxiv
  • Zero-inflation in the Multivariate Poisson Lognormal Family
    Bastien Batardière, Julien Chiquet, François Gindraud and Mahendra Mariadassou.
    Arxiv
  • Importance sampling-based gradient method for dimension reduction in Poisson log-normal model
    Bastien Batardière, Julien Chiquet, Joon Kwon and Julien Stoehr.
    Arxiv
  • Evaluating Parameter Uncertainty in the Poisson Lognormal Model with Corrected Variational Estimators
    Bastien Batardière, Julien Chiquet and Mahendra Mariadassou.
    Arxiv
  • pyPLNmodels: A Python package to analyze multivariate high-dimensional count data
    Bastien Batardière, Joon Kwon and Julien Chiquet.
    Arxiv